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Mammalian PromoterCAD template files for adding regulatory motif data

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These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
Mammalian PromoterCAD:
http://promotercad.org/mammal
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詳細情報を見たいファイルをプルダウンメニューから選択して下さい。
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.en
#file_name MammalianPromoterCAD_GeneAtlas_Dendritic_cells_Template
#download_from http://linkdata.org/work/rdf1s1067i
#namespace Gene http://www.ncbi.nlm.nih.gov/gene/
#property motif motif name motif sequence motif position Probe ID label:dendritic_cells_lymphoid_CD8a+ label:dendritic_cells_myeloid_CD8a- label:dendritic_plasmacytoid_B220+
#object_type_xsd string string string float string float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
Gene:54161 1415670_at 467.32757 614.4371 608.83801
Gene:11972 1415671_at 1282.28845 1757.65336 1551.7549
Gene:57437 1415672_at 2489.52962 3283.20768 1825.27815
Gene:100678 1415673_at 153.39564 113.98911 238.09925
Gene:60409 1415674_a_at 458.30956 473.08434 469.55769
Gene:13481 1415675_at 263.73475 332.69395 398.86774
Gene:19173 1415676_a_at 2335.92773 2666.7518 1925.82093
Gene:52585 1415677_at 568.418 379.27632 182.75331
Gene:19042 1415678_at 829.93601 758.00938 907.30682
Gene:66340 1415679_at 1624.37529 2834.1146 2550.26658
Gene:17222 1415680_at 689.53563 685.18549 752.39748
Gene:94067 1415681_at 467.95523 435.43948 307.25707
Gene:65246 1415682_at 73.21222 91.93895 79.91124
Gene:18107 1415683_at 3445.78065 3311.68964 2746.61195
Gene:11793 1415684_at 165.48006 270.59325 285.93
Gene:76784 1415685_at 225.55224 244.39442 285.12541
Gene:68365 1415686_at 750.41008 919.87773 678.1678
Gene:19156 1415687_a_at 14791.91906 16982.37181 15977.49653
Gene:67128 1415688_at 713.97992 679.90217 766.96878
Gene:72739 1415689_s_at 449.55532 641.04125 676.14335
Gene:94064 1415690_at 363.50981 312.96921 320.37249
Gene:13383 1415691_at 986.7684 825.78297 769.48221
Gene:12330 1415692_s_at 5501.59437 6066.15477 5028.35237
Gene:67819 1415693_at 198.3194 294.38598 272.46783
Gene:22375 1415694_at 39.4734 63.1947 63.87954
Gene:26440 1415695_at 2997.6731 4669.02554 2166.35439
Gene:20224 1415696_at 817.11625 812.79043 826.7345
Gene:23881 1415697_at 957.35024 652.23064 739.32618
Gene:105348 1415698_at 131.66641 112.53128 283.03275
Gene:209318 1415699_a_at 1175.92505 1397.68674 1222.20429
Gene:67437 1415700_a_at 1901.93778 2062.09746 1806.32603
Gene:65019 1415701_x_at 17117.60657 23509.36181 16795.21928
Gene:13016 1415702_a_at 1308.49553 1380.08905 1757.26598
Gene:59026 1415703_at 552.18559 334.0219 607.73369
Gene:321022 1415704_a_at 626.39367 534.71493 516.51358
Gene:66818 1415705_at 257.2972 463.31879 373.56861
Gene:12847 1415706_at 2047.03285 2023.50286 1922.37576
Gene:99152 1415707_at 482.05574 507.57332 510.33822
Gene:544752 1415708_at 845.97327 817.78894 759.43483
Gene:107338 1415709_s_at 124.00844 159.93019 146.56412
Gene:231430 1415710_at 224.78285 200.90499 164.22579
Gene:211673 1415711_at 814.08929 957.02049 775.70492
Gene:360216 1415712_at 190.04212 113.48643 147.49115
Gene:27225 1415713_a_at 242.40481 336.46121 359.89952
Gene:66618 1415714_a_at 222.65471 220.13082 241.65817
Gene:68366 1415715_at 78.21987 54.09 61.9676
Gene:100043813 1415716_a_at 25361.7402 31555.04961 25424.12102
Gene:57294 1415716_a_at 25361.7402 31555.04961 25424.12102
Gene:66743 1415717_at 254.9601 298.19769 337.16527
Gene:50724 1415718_at 259.11576 193.22435 248.06651
Gene:74252 1415719_s_at 222.35062 288.22612 226.2075
Gene:66591 1415720_s_at 59.74431 126.14916 94.38973
Gene:74763 1415721_a_at 133.44683 280.30119 218.6716
Gene:66201 1415722_a_at 791.44141 826.74152 612.09845
Gene:217869 1415723_at 1942.0892 2285.58751 2445.91844
Gene:12540 1415724_a_at 4505.81125 8163.93051 4262.90417
Gene:106298 1415725_at 222.84595 212.43791 196.05652
Gene:81702 1415726_at 427.66797 304.28743 391.63313
Gene:246703 1415727_at 620.756 957.76016 900.58811
Gene:54196 1415728_at 104.85253 58.55276 63.54236
Gene:18607 1415729_at 479.84828 390.77996 958.67305
Gene:269061 1415730_at 1177.16198 973.6182 1016.79394
Gene:52477 1415731_at 40.63145 48.65264 56.77963
Gene:193742 1415732_at 188.04917 168.88395 209.86086
Gene:68512 1415733_a_at 693.8328 682.64878 768.91172
Gene:19349 1415734_at 4252.88568 4733.17693 2934.61333
Gene:13194 1415735_at 472.97889 472.97889 472.97889
Gene:56612 1415736_at 987.69921 1314.70943 618.56166
Gene:54391 1415737_at 532.40572 579.55271 551.18366
Gene:66073 1415738_at 69.79815 180.61801 154.76033
Gene:68035 1415739_at 792.96438 1242.57059 928.52222
Gene:19184 1415740_at 594.58442 657.3895 507.12638
Gene:21982 1415741_at 1409.37917 1407.33514 1282.74651
Gene:11993 1415742_at 269.76622 419.98267 272.70221
Gene:15184 1415743_at 116.64352 250.92989 463.07157
Gene:14976 1415744_at 621.61828 906.43388 749.02479
Gene:13185 1415745_a_at 792.02471 881.0072 690.65878
Gene:71722 1415746_at 267.86107 191.88859 309.0623
Gene:66878 1415747_s_at 2019.24512 1875.38383 1223.17548
Gene:59288 1415748_a_at 202.71752 292.10286 213.34167
Gene:54170 1415749_a_at 1652.83761 1947.57068 1689.54668
Gene:213773 1415750_at 52.98199 102.98963 93.01921
Gene:15441 1415751_at 1525.03114 1364.67344 1721.10048
Gene:407819 1415752_at 822.62816 986.5764 943.70376
Gene:216169 1415753_at 648.56806 931.53603 1399.9504
Gene:69833 1415754_at 565.49542 621.52689 564.92655
Gene:66589 1415755_a_at 563.45006 836.1263 609.0291
Gene:20615 1415756_a_at 155.03663 201.6172 285.42759
Gene:107338 1415757_at 46.61157 40.21006 63.75978
* Row count is limited to 100.