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Mammalian PromoterCAD template files for adding regulatory motif data

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These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
Mammalian PromoterCAD:
http://promotercad.org/mammal
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詳細情報を見たいファイルをプルダウンメニューから選択して下さい。
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.en
#file_name MammalianPromoterCAD_GeneAtlas_Heart_Muscle_Template
#download_from http://linkdata.org/work/rdf1s1067i
#namespace Gene http://www.ncbi.nlm.nih.gov/gene/
#property motif motif name motif sequence motif position Probe ID label:heart label:skeletal_muscle
#object_type_xsd string string string float string float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion
Gene:54161 1415670_at 612.26705 1021.01187
Gene:11972 1415671_at 1141.86301 1277.61006
Gene:57437 1415672_at 2306.52059 2364.35459
Gene:100678 1415673_at 90.20277 313.6833
Gene:60409 1415674_a_at 544.29593 471.79017
Gene:13481 1415675_at 105.7859 119.28757
Gene:19173 1415676_a_at 2022.22198 3707.19964
Gene:52585 1415677_at 535.93781 598.01954
Gene:19042 1415678_at 3422.08991 5064.8499
Gene:66340 1415679_at 2305.05915 3517.75836
Gene:17222 1415680_at 304.39948 206.75638
Gene:94067 1415681_at 1228.85959 860.38314
Gene:65246 1415682_at 196.69726 317.65997
Gene:18107 1415683_at 2078.60328 1162.69196
Gene:11793 1415684_at 324.08612 414.88381
Gene:76784 1415685_at 1075.38352 846.20957
Gene:68365 1415686_at 1315.62393 942.16594
Gene:19156 1415687_a_at 11241.44052 9433.68312
Gene:67128 1415688_at 2867.08206 4404.97187
Gene:72739 1415689_s_at 610.01735 360.77279
Gene:94064 1415690_at 3001.20515 2822.84455
Gene:13383 1415691_at 1131.44921 1229.44663
Gene:12330 1415692_s_at 5772.6793 2157.23749
Gene:67819 1415693_at 191.595 371.09311
Gene:22375 1415694_at 97.69291 142.90287
Gene:26440 1415695_at 5479.78811 4645.96459
Gene:20224 1415696_at 1743.09447 1749.56262
Gene:23881 1415697_at 222.21071 321.97087
Gene:105348 1415698_at 266.03064 986.94006
Gene:209318 1415699_a_at 652.82833 1249.0585
Gene:67437 1415700_a_at 3784.68899 5962.02205
Gene:65019 1415701_x_at 22071.96811 18746.67537
Gene:13016 1415702_a_at 3319.21521 4282.60758
Gene:59026 1415703_at 1579.75291 1259.70807
Gene:321022 1415704_a_at 3223.26298 6940.10475
Gene:66818 1415705_at 550.19522 383.52614
Gene:12847 1415706_at 2783.41829 2459.66117
Gene:99152 1415707_at 449.56905 498.88227
Gene:544752 1415708_at 798.99642 988.24073
Gene:107338 1415709_s_at 279.2439 348.52213
Gene:231430 1415710_at 362.24931 395.30233
Gene:211673 1415711_at 1503.30501 1577.79712
Gene:360216 1415712_at 835.79465 1916.15827
Gene:27225 1415713_a_at 540.06774 581.90008
Gene:66618 1415714_a_at 1095.71869 2156.45505
Gene:68366 1415715_at 239.47199 73.73738
Gene:100043813 1415716_a_at 18656.24667 26388.0233
Gene:57294 1415716_a_at 18656.24667 26388.0233
Gene:66743 1415717_at 125.30471 318.03799
Gene:50724 1415718_at 1118.85733 1252.11415
Gene:74252 1415719_s_at 766.55881 655.66729
Gene:66591 1415720_s_at 156.86631 305.22171
Gene:74763 1415721_a_at 357.57946 474.74503
Gene:66201 1415722_a_at 358.81579 445.93316
Gene:217869 1415723_at 1986.60253 2528.69861
Gene:12540 1415724_a_at 1929.97639 3127.9083
Gene:106298 1415725_at 216.25511 481.43939
Gene:81702 1415726_at 940.30009 647.4404
Gene:246703 1415727_at 1391.15865 1374.0985
Gene:54196 1415728_at 30.12396 89.16801
Gene:18607 1415729_at 539.85793 475.7909
Gene:269061 1415730_at 593.42738 405.9385
Gene:52477 1415731_at 63.5866 138.08354
Gene:193742 1415732_at 298.96897 998.90703
Gene:68512 1415733_a_at 3350.18724 1536.12965
Gene:19349 1415734_at 3815.20553 5110.54972
Gene:13194 1415735_at 1184.5915 1054.58964
Gene:56612 1415736_at 2993.99555 2724.39688
Gene:54391 1415737_at 1064.92924 1609.96122
Gene:66073 1415738_at 527.12295 222.90327
Gene:68035 1415739_at 868.29062 1019.52405
Gene:19184 1415740_at 1145.03507 2820.39154
Gene:21982 1415741_at 945.53998 803.54317
Gene:11993 1415742_at 211.31635 566.5841
Gene:15184 1415743_at 249.46072 173.41654
Gene:14976 1415744_at 851.93104 1498.97815
Gene:13185 1415745_a_at 364.95599 225.0941
Gene:71722 1415746_at 120.78976 85.92868
Gene:66878 1415747_s_at 1809.94025 3349.56148
Gene:59288 1415748_a_at 232.14494 256.51985
Gene:54170 1415749_a_at 1090.61717 820.24139
Gene:213773 1415750_at 82.89786 122.9797
Gene:15441 1415751_at 1488.8347 1227.48401
Gene:407819 1415752_at 990.70621 821.93048
Gene:216169 1415753_at 920.08897 1726.93823
Gene:69833 1415754_at 1328.1969 1338.53744
Gene:66589 1415755_a_at 727.57499 1287.17713
Gene:20615 1415756_a_at 1354.13683 2411.19209
Gene:107338 1415757_at 279.726 782.61074
* Row count is limited to 100.