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データセットの情報

Mammalian PromoterCAD template files for adding regulatory motif data

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These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
Mammalian PromoterCAD:
http://promotercad.org/mammal
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詳細情報を見たいファイルをプルダウンメニューから選択して下さい。
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.en
#file_name MammalianPromoterCAD_GeneAtlas_Spleen_Lymph_node_Template
#download_from http://linkdata.org/work/rdf1s1067i
#namespace Gene http://www.ncbi.nlm.nih.gov/gene/
#property motif motif name motif sequence motif position Probe ID label:bone label:bone_marrow label:lymph_nodes label:spleen
#object_type_xsd string string string float string float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
Gene:54161 1415670_at 663.37441 884.3392 1441.35655 967.7167
Gene:11972 1415671_at 2290.76014 3247.15413 2141.46971 2101.5176
Gene:57437 1415672_at 4292.98817 4525.20137 3714.58563 3547.76752
Gene:100678 1415673_at 218.64129 200.30224 341.19113 283.01847
Gene:60409 1415674_a_at 624.23308 617.8478 709.34752 553.30797
Gene:13481 1415675_at 317.00392 384.50029 465.92233 357.28607
Gene:19173 1415676_a_at 2159.12361 2572.93137 2221.1021 1712.33898
Gene:52585 1415677_at 395.10842 555.02524 768.05483 739.64006
Gene:19042 1415678_at 1003.3542 1068.94335 637.31543 608.62744
Gene:66340 1415679_at 3524.00669 3336.36847 4482.10647 4134.37113
Gene:17222 1415680_at 885.15087 830.06893 622.08253 560.86436
Gene:94067 1415681_at 626.2446 720.39182 737.93971 855.00412
Gene:65246 1415682_at 4416.7089 8310.46101 222.37642 332.95447
Gene:18107 1415683_at 2173.7906 2539.87639 2581.18272 2068.055
Gene:11793 1415684_at 302.10808 339.73907 477.54932 349.48422
Gene:76784 1415685_at 279.76685 434.35029 440.71728 274.34843
Gene:68365 1415686_at 937.43273 851.86851 955.49294 1083.21492
Gene:19156 1415687_a_at 13263.45176 16817.52342 22965.81916 22037.30769
Gene:67128 1415688_at 1043.42015 908.54209 1195.52385 837.34823
Gene:72739 1415689_s_at 371.46799 337.22009 447.34011 865.939
Gene:94064 1415690_at 1278.03461 1259.99166 1334.21489 624.66381
Gene:13383 1415691_at 821.46186 690.43838 811.66219 1042.18867
Gene:12330 1415692_s_at 8349.29056 7279.41561 7072.34954 6321.29602
Gene:67819 1415693_at 415.51141 399.3581 298.92896 288.23558
Gene:22375 1415694_at 44.87564 72.5971 150.98418 114.94254
Gene:26440 1415695_at 7706.87693 8489.90525 6220.59332 4768.33066
Gene:20224 1415696_at 967.1048 524.20895 831.07087 883.95788
Gene:23881 1415697_at 577.96149 526.27715 695.28455 599.5131
Gene:105348 1415698_at 487.44257 558.36267 375.43702 311.92195
Gene:209318 1415699_a_at 582.75231 610.89023 798.56214 807.95786
Gene:67437 1415700_a_at 3437.76543 2482.18836 2749.20335 2549.66795
Gene:65019 1415701_x_at 43040.21849 35209.35737 48189.7784 46097.6914
Gene:13016 1415702_a_at 3737.5548 4348.53008 2305.67905 3110.28119
Gene:59026 1415703_at 818.87752 1090.96436 1734.54453 2201.60597
Gene:321022 1415704_a_at 3244.95836 2124.38434 1980.46707 2252.70331
Gene:66818 1415705_at 345.89336 369.65846 269.47884 175.76528
Gene:12847 1415706_at 2648.98551 2985.6458 3987.87727 3662.18923
Gene:99152 1415707_at 577.96834 777.5435 749.88923 707.95661
Gene:544752 1415708_at 2560.45631 1919.10094 2125.6935 2494.42717
Gene:107338 1415709_s_at 118.77671 173.72322 181.42089 251.65111
Gene:231430 1415710_at 208.1452 211.71507 313.7505 332.26927
Gene:211673 1415711_at 1640.04346 1497.28413 1139.4389 1329.1512
Gene:360216 1415712_at 369.42147 323.11114 209.82154 316.59192
Gene:27225 1415713_a_at 277.73037 368.06119 543.81638 524.48497
Gene:66618 1415714_a_at 788.29599 978.28419 937.54663 572.89941
Gene:68366 1415715_at 118.00302 191.36966 99.28504 101.77436
Gene:100043813 1415716_a_at 36362.58538 33117.81082 55608.90033 56982.23471
Gene:57294 1415716_a_at 36362.58538 33117.81082 55608.90033 56982.23471
Gene:66743 1415717_at 210.74036 257.47563 341.58676 399.0235
Gene:50724 1415718_at 203.1709 221.22013 321.09708 423.96563
Gene:74252 1415719_s_at 470.97211 452.76148 239.166 329.32848
Gene:66591 1415720_s_at 384.14418 513.42334 150.36846 158.1597
Gene:74763 1415721_a_at 369.45797 441.90414 514.72849 609.73259
Gene:66201 1415722_a_at 609.14672 701.44339 582.44151 522.73862
Gene:217869 1415723_at 4768.88692 5396.83514 3449.17721 3397.03635
Gene:12540 1415724_a_at 6403.89065 6319.21541 7731.3149 6347.8241
Gene:106298 1415725_at 198.72901 116.66659 134.22423 148.72277
Gene:81702 1415726_at 846.11616 791.16207 739.36807 675.78891
Gene:246703 1415727_at 622.69461 578.54787 705.76833 568.18395
Gene:54196 1415728_at 321.69014 305.96584 238.55949 441.099
Gene:18607 1415729_at 1191.193 1145.51428 679.73727 665.81763
Gene:269061 1415730_at 1029.64664 1143.54428 1360.65493 1794.29026
Gene:52477 1415731_at 140.98919 124.97834 151.94301 190.39835
Gene:193742 1415732_at 270.80875 434.8543 234.27957 292.62244
Gene:68512 1415733_a_at 830.90694 786.83948 879.15691 916.01231
Gene:19349 1415734_at 2320.23319 2824.13121 3563.01952 2724.66318
Gene:13194 1415735_at 1371.11587 1562.68796 928.9581 1154.43538
Gene:56612 1415736_at 4304.4449 3076.78137 8638.2359 5478.2962
Gene:54391 1415737_at 728.39263 700.15423 818.26792 676.32611
Gene:66073 1415738_at 289.88338 282.41151 416.98269 281.92137
Gene:68035 1415739_at 622.61996 885.48631 1236.54842 1419.5663
Gene:19184 1415740_at 1364.45751 1769.23729 1520.00428 1229.90304
Gene:21982 1415741_at 2005.23246 2249.07474 1850.46552 1421.72933
Gene:11993 1415742_at 464.73801 696.36472 801.47759 813.86006
Gene:15184 1415743_at 107.5465 128.49295 108.44767 160.09573
Gene:14976 1415744_at 1445.19731 1492.91565 880.9651 944.85122
Gene:13185 1415745_a_at 488.74022 416.09974 567.8353 489.02474
Gene:71722 1415746_at 196.74596 264.70437 291.12625 599.26287
Gene:66878 1415747_s_at 4419.73204 4246.78447 1622.43908 1508.79841
Gene:59288 1415748_a_at 477.28104 641.35908 741.56907 689.88435
Gene:54170 1415749_a_at 1220.92499 1088.21983 1293.12041 1092.96673
Gene:213773 1415750_at 63.5004 114.47572 110.67499 115.53875
Gene:15441 1415751_at 2584.01145 2981.75548 2911.96125 2469.89245
Gene:407819 1415752_at 1589.92426 1482.34521 1434.346 1333.38259
Gene:216169 1415753_at 556.11647 1018.94919 1703.89466 2046.11588
Gene:69833 1415754_at 1103.95491 1108.58608 824.22047 590.00909
Gene:66589 1415755_a_at 583.84892 996.79594 882.59613 997.84443
Gene:20615 1415756_a_at 353.1873 231.91941 635.13422 412.77877
Gene:107338 1415757_at 49.3844 82.22046 208.05247 281.54671
* Row count is limited to 100.